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1

Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes

Comas, Iñaki, Borrell, Sonia, Roetzer, Andreas, Rose, Graham, Malla, Bijaya, Kato-Maeda, Midori, Galagan, James, Niemann, Stefan, Gagneux, Sebastien

Journal:

Nature Genetics

Year:

2011

Language:

english

File:

PDF, 647 KB

english, 2011

2

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans

Comas, Iñaki, Coscolla, Mireia, Luo, Tao, Borrell, Sonia, Holt, Kathryn E, Kato-Maeda, Midori, Parkhill, Julian, Malla, Bijaya, Berg, Stefan, Thwaites, Guy, Yeboah-Manu, Dorothy, Bothamley, Graham, Me

Journal:

Nature Genetics

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

3

Metabolomic Signatures in Guinea Pigs Infected with Epidemic-Associated W-Beijing Strains of Mycobacterium tuberculosis

Somashekar, Bagganahalli S., Amin, Anita G., Tripathi, Pratima, MacKinnon, Neil, Rithner, Christopher D., Shanley, Crystal A, Basaraba, Randall, Henao-Tamayo, Marcela, Kato-Maeda, Midori, Ramamoorthy,

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.78 MB

english, 2012

4

Microarray analysis of pathogens and their interaction with hosts : Technoreview

Midori Kato-Maeda, Qian Gao, Peter M. Small

Journal:

Cellular Microbiology

Year:

2001

Language:

english

File:

PDF, 603 KB

english, 2001

5

IL-24 modulates IFN-γ expression in patients with tuberculosis

Bo Wu, Chunhong Huang, Midori Kato-Maeda, Philip C. Hopewell, Charles L. Daley, Alan M. Krensky, Carol Clayberger

Journal:

Immunology Letters

Year:

2008

Language:

english

File:

PDF, 149 KB

english, 2008

6

Molecular Analysis of Mycobacterium tuberculosis Strains with an Intact pks15/1 Gene in a Rural Community of Mexico

Areli Martinez-Gamboa, Alfredo Ponce-de-Leon, Arturo Galindo-Fraga, Miriam Bobadilla-del-Valle, Midori Kato-Maeda, Brian D. Robertson, Douglas B. Young, Peter M. Small, José Sifuentes-Osornio

Journal:

Archives of Medical Research

Year:

2008

Language:

english

File:

PDF, 193 KB

english, 2008

7

IL-9 is associated with an impaired Th1 immune response in patients with tuberculosis

Bo Wu, Chunhong Huang, Midori Kato-Maeda, Philip C. Hopewell, Charles L. Daley, Alan M. Krensky, Carol Clayberger

Journal:

Clinical Immunology

Year:

2008

Language:

english

File:

PDF, 756 KB

english, 2008

8

Screening for tuberculosis in pregnancy

S Navarro-Alvarez, M Bobadilla del Valle, M Kato-Maeda

Journal:

International Journal of Gynecology & Obstetrics

Year:

2002

Language:

english

File:

PDF, 167 KB

english, 2002

9

Drug resistance among acid-fast bacilli

M Kato-Maeda, *J Sifuentes-Osornio, M Babadilla-del-Valle, GM Ruiz-Palacios, A Ponce-de-León

Journal:

Year:

1999

Language:

english

File:

PDF, 57 KB

english, 1999

10

Molecular Epidemiology of Tuberculosis in Foreign-Born Persons Living in San Francisco

Suwanpimolkul, Gompol, Jarlsberg, Leah G., Grinsdale, Jennifer A., Osmond, Dennis, Kawamura, L. Masae, Hopewell, Philip C., Kato-Maeda, Midori

Journal:

American Journal of Respiratory and Critical Care Medicine

Year:

2013

Language:

english

File:

PDF, 1.11 MB

english, 2013

11

Influence of M. tuberculosis Lineage Variability within a Clinical Trial for Pulmonary Tuberculosis

Nahid, Payam, Bliven, Erin E., Kim, Elizabeth Y., Mac Kenzie, William R., Stout, Jason E., Diem, Lois, Johnson, John L., Gagneux, Sebastien, Hopewell, Philip C., Kato-Maeda, Midori, Marais, Ben

Journal:

Year:

2010

Language:

english

File:

PDF, 152 KB

english, 2010

12

Sublineages of lineage 4 (Euro-American) Mycobacterium tuberculosis differ in genotypic clustering

Anderson, J., Jarlsberg, L. G., Grindsdale, J., Osmond, D., Kawamura, M., Hopewell, P. C., Kato-Maeda, M.

Journal:

The International Journal of Tuberculosis and Lung Disease

Year:

2013

Language:

english

File:

PDF, 291 KB

english, 2013

13

Genotyping of Mycobacterium tuberculosis : application in epidemiologic studies

Kato-Maeda, Midori, Metcalfe, John Z, Flores, Laura

Journal:

Future Microbiology

Year:

2011

Language:

english

File:

PDF, 555 KB

english, 2011

14

Messenger RNA Expression of IL-8, FOXP3, and IL-12 Differentiates Latent Tuberculosis Infection from Disease

Wu, B., Huang, C., Kato-Maeda, M., Hopewell, P. C., Daley, C. L., Krensky, A. M., Clayberger, C.

Journal:

The Journal of Immunology

Year:

2007

Language:

english

File:

PDF, 669 KB

english, 2007

15

Variable host-pathogen compatibility in Mycobacterium tuberculosis

Gagneux, S., DeRiemer, K., Van, T., Kato-Maeda, M., de Jong, B. C., Narayanan, S., Nicol, M., Niemann, S., Kremer, K., Gutierrez, M. C., Hilty, M., Hopewell, P. C., Small, P. M.

Journal:

Proceedings of the National Academy of Sciences

Year:

2006

Language:

english

File:

PDF, 446 KB

english, 2006

16

Genomic Epidemiology of Multidrug-Resistant Mycobacterium tuberculosis During Transcontinental Spread

Coscolla, Mireia, Barry, Pennan M., Oeltmann, John E., Koshinsky, Heather, Shaw, Tambi, Cilnis, Martin, Posey, Jamie, Rose, Jordan, Weber, Terry, Fofanov, Viacheslav Y., Gagneux, Sebastien, Kato-Maeda

Journal:

The Journal of Infectious Diseases

Year:

2015

Language:

english

File:

PDF, 1.04 MB

english, 2015

17

[American Thoracic Society American Thoracic Society 2012 International Conference, May 18-23, 2012 • San Francisco, California - ()] B54. TUBERCULOSIS IN SPECIAL POPULATIONS - Epidemiologic And Clinical Associations With Sublineages Of The Euro-American Lineage Of Mycobacterium Tuberculosis

Kato-Maeda, Midori, Anderson, Jillian, Jarlsberg, Leah G., Grindsdale, Jennifer, Osmond, Dennis, Kawamura, Masae, Hopewell, Philip C.

Year:

2012

Language:

english

File:

PDF, 21 KB

english, 2012

18

Beijing Sublineages of Mycobacterium tuberculosis Differ in Pathogenicity in the Guinea Pig

Kato-Maeda, M., Shanley, C. A., Ackart, D., Jarlsberg, L. G., Shang, S., Obregon-Henao, A., Harton, M., Basaraba, R. J., Henao-Tamayo, M., Barrozo, J. C., Rose, J., Kawamura, L. M., Coscolla, M., Fofa

Journal:

Clinical and Vaccine Immunology

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

19

Microevolution of the Direct Repeat Locus of Mycobacterium tuberculosis in a Strain Prevalent in San Francisco

Aga, R. S., Fair, E., Abernethy, N. F., DeRiemer, K., Paz, E. A., Kawamura, L. M., Small, P. M., Kato-Maeda, M.

Journal:

Journal of Clinical Microbiology

Year:

2006

Language:

english

File:

PDF, 44 KB

english, 2006

20

Large Sequence Polymorphisms Classify Mycobacterium tuberculosis Strains with Ancestral Spoligotyping Patterns

Flores, L., Van, T., Narayanan, S., DeRiemer, K., Kato-Maeda, M., Gagneux, S.

Journal:

Journal of Clinical Microbiology

Year:

2007

Language:

english

File:

PDF, 49 KB

english, 2007

21

Comparison of Sodium Carbonate, Cetyl-Pyridinium Chloride, and Sodium Borate for Preservation of Sputa for Culture of Mycobacterium tuberculosis

Bobadilla-del-Valle, M., Ponce-de-Leon, A., Kato-Maeda, M., Hernandez-Cruz, A., Calva-Mercado, J. J., Chavez-Mazari, B., Caballero-Rivera, B. A., Nolasco-Garcia, J. C., Sifuentes-Osornio, J.

Journal:

Journal of Clinical Microbiology

Year:

2003

Language:

english

File:

PDF, 37 KB

english, 2003

22

Unique Gene Expression Profiles in Infants Vaccinated with Different Strains of Mycobacterium bovis Bacille Calmette-Guerin

Wu, B., Huang, C., Garcia, L., de Leon, A. P., Osornio, J. S., Bobadilla-del-Valle, M., Ferreira, L., Canizales, S., Small, P., Kato-Maeda, M., Krensky, A. M., Clayberger, C.

Journal:

Infection and Immunity

Year:

2007

Language:

english

File:

PDF, 284 KB

english, 2007

23

Novel Hot Spot of IS6110 Insertion in Mycobacterium tuberculosis

Kim, E. Y., Nahid, P., Hopewell, P. C., Kato-Maeda, M.

Journal:

Journal of Clinical Microbiology

Year:

2010

Language:

english

File:

PDF, 354 KB

english, 2010

24

Use of Rapid Genomic Deletion Typing To Monitor a Tuberculosis Outbreak within an Urban Homeless Population

Freeman, R., Kato-Maeda, M., Hauge, K. A., Horan, K. L., Oren, E., Narita, M., Wallis, C. K., Cave, D., Nolan, C. M., Small, P. M., Cangelosi, G. A.

Journal:

Journal of Clinical Microbiology

Year:

2005

Language:

english

File:

PDF, 100 KB

english, 2005

25

Functional and evolutionary genomics of Mycobacterium tuberculosis: Insights from genomic deletions in 100 strains

Tsolaki, A. G., Hirsh, A. E., DeRiemer, K., Enciso, J. A., Wong, M. Z., Hannan, M., de la Salmoniere, Y.-O. L. G., Aman, K., Kato-Maeda, M., Small, P. M.

Journal:

Proceedings of the National Academy of Sciences

Year:

2004

Language:

english

File:

PDF, 443 KB

english, 2004

26

Multidrug-Resistant Tuberculosis Among Patients in Baja California, Mexico, and Hispanic Patients in California

Bojorquez, Ietza, Barnes, Richard F. W., Flood, Jennifer, López-Gatell, Hugo, Garfein, Richard S., Bäcker, Claudia E., Alpuche, Celia, Vinetz, Joseph M., Catanzaro, Antonino, Kato-Maeda, Midori, Rodwe

Journal:

American Journal of Public Health

Year:

2013

Language:

english

File:

PDF, 487 KB

english, 2013

27

Serum biomarkers of treatment response within a randomized clinical trial for pulmonary tuberculosis

Jayakumar, A., Vittinghoff, E., Segal, M.R., MacKenzie, W.R., Johnson, J.L., Gitta, P., Saukkonen, J., Anderson, J., Weiner, M., Engle, M., Yoon, C., Kato-Maeda, M., Nahid, P.

Journal:

Year:

2015

Language:

english

File:

PDF, 592 KB

english, 2015

28

Mycobacterium tuberculosis Lineage--What's in Your Lungs?

Kato-Maeda, M., Nahid, P.

Journal:

Clinical Infectious Diseases

Year:

2012

Language:

english

File:

PDF, 100 KB

english, 2012

29

User's Guide to Tuberculosis Resources on the Internet

Yu, V. L., Kato-Maeda, M., Small, P. M.

Journal:

Clinical Infectious Diseases

Year:

2001

Language:

english

File:

PDF, 95 KB

english, 2001

30

Genomic Analysis Distinguishes Mycobacterium africanum

Mostowy, S., Onipede, A., Gagneux, S., Niemann, S., Kremer, K., Desmond, E. P., Kato-Maeda, M., Behr, M.

Journal:

Journal of Clinical Microbiology

Year:

2004

Language:

english

File:

PDF, 78 KB

english, 2004

31

Comparison of Restriction Fragment Length Polymorphism with the Polymorphic Guanine-Cytosine-Rich Sequence and Spoligotyping for Differentiation of Mycobacterium tuberculosis Isolates with Five or Fewer Copies of IS6110

Flores, L., Jarlsberg, L. G., Kim, E. Y., Osmond, D., Grinsdale, J., Kawamura, M., Desmond, E., Hopewell, P. C., Kato-Maeda, M.

Journal:

Journal of Clinical Microbiology

Year:

2010

Language:

english

File:

PDF, 58 KB

english, 2010

32

Trypanosoma brucei rhodesiense Infection Imported to Mexico from a Tourist Resort in Kenya

Ponce-de-Leon, S., Lisker-Melman, M., Kato-Maeda, M., Gamboa-Dominguez, A., Ontiveros, C., Behrens, R. H., Gonzalez-Ruiz, A.

Journal:

Clinical Infectious Diseases

Year:

1996

Language:

english

File:

PDF, 2.01 MB

english, 1996

33

Identifying locations of recent TB transmission in rural Uganda: a multidisciplinary approach

Chamie, Gabriel, Wandera, Bonnie, Marquez, Carina, Kato-Maeda, Midori, Kamya, Moses R., Havlir, Diane V., Charlebois, Edwin D.

Journal:

Tropical Medicine & International Health

Year:

2015

Language:

english

File:

PDF, 399 KB

english, 2015

34

Determinants of Multidrug-Resistant Tuberculosis Clusters, California, USA, 2004–2007

Metcalfe, John Z., Kim, Elizabeth Y., Lin, S.-Y. Grace, Cattamanchi, Adithya, Oh, Peter, Flood, Jennifer, Hopewell, Philip C., Kato-Maeda, Midori

Journal:

Emerging Infectious Diseases

Year:

2010

Language:

english

File:

PDF, 6.03 MB

english, 2010

35

Reduced sensitivity of the QuantiFERON® test in diabetic patients with smear-negative tuberculosis

Choi, J. C., Jarlsberg, L. G., Grinsdale, J. A., Osmond, D. H., Higashi, J., Hopewell, P. C., Kato-Maeda, M.

Journal:

The International Journal of Tuberculosis and Lung Disease

Year:

2015

Language:

english

File:

PDF, 87 KB

english, 2015

36

Interferon Gamma Release Assay Compared With the Tuberculin Skin Test for Latent Tuberculosis Detection in Pregnancy

Worjoloh, Ayaba, Kato-Maeda, Midori, Osmond, Dennis, Freyre, Rachel, Aziz, Natali, Cohan, Deborah

Journal:

Obstetrics & Gynecology

Year:

2011

Language:

english

File:

PDF, 239 KB

english, 2011

37

Likelihood-based inference for discretely observed birth-death-shift processes, with applications to evolution of mobile genetic elements

Xu, Jason, Guttorp, Peter, Kato-Maeda, Midori, Minin, Vladimir N.

Journal:

Year:

2015

Language:

english

File:

PDF, 431 KB

english, 2015

38

[American Thoracic Society American Thoracic Society 2009 International Conference, May 15-20, 2009 • San Diego, California - ()] A96. TUBERCULOSIS: ASSESSING TRANSMISSION AND RISK - Transmission of Multidrug Resistant Tuberculosis in California.

Metcalfe, JZ, Cattamanchi, A, Lin, G, Kim, E, Kato-Maeda, M, Hopewell, P, Flood, J

Year:

2009

Language:

english

File:

PDF, 153 KB

english, 2009

39

Trypanosoma brucei rhodesiense Infection Imported to Mexico from a Tourist Resort in Kenya

Samuel Ponce-de-León , Mauricio Lisker-Melman, Midori Kato-Maeda, Armando Gamboa-Domínguez , Consuelo Ontiveros, Ronald H. Behrens and Armando González-Ruiz

Journal:

Clinical Infectious Diseases

Year:

1996

Language:

english

File:

PDF, 381 KB

english, 1996

40

Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages

Stucki, David, Brites, Daniela, Jeljeli, Leïla, Coscolla, Mireia, Liu, Qingyun, Trauner, Andrej, Fenner, Lukas, Rutaihwa, Liliana, Borrell, Sonia, Luo, Tao, Gao, Qian, Kato-Maeda, Midori, Ballif, Mari

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 5.62 MB

english, 2016

41

Fitting birth–death processes to panel data with applications to bacterial DNA fingerprinting

Doss, Charles R., Suchard, Marc A., Holmes, Ian, Kato-Maeda, Midori, Minin, Vladimir N.

Journal:

The Annals of Applied Statistics

Year:

2013

Language:

english

File:

PDF, 279 KB

english, 2013

42

[American Thoracic Society American Thoracic Society 2012 International Conference, May 18-23, 2012 • San Francisco, California - ()] B57. IMPROVING OUTCOME IN TUBERCULOSIS - Competitive Fitness Cost Of Moxifloxacin-Resistant Mycobacterium Tuberculosis

Barrozo, Joyce, Flores, Laura, Anderson, Jillian, Rose, Jordan, Small, Peter, Kato-Maeda, Midori, Gagneux, Sebastien

Year:

2012

Language:

english

File:

PDF, 18 KB

english, 2012

43

Comparing Genomes within the Species Mycobacterium tuberculosis

Journal:

Genome Research

Year:

2001

Language:

english

File:

PDF, 598 KB

english, 2001

44

[American Thoracic Society American Thoracic Society 2012 International Conference, May 18-23, 2012 • San Francisco, California - ()] A14. TUBERCULOSIS HOST DEFENSE - Innate Immune Response To Stimulation With M. Tuberculosis Varies By Host Ethnicity And By Strain

Nahid, Payam, Jarlsberg, Leah J., Osmond, Dennis, Inman, Michael, Sambrano, Elise, Kato-Maeda, Midori, Dobos, Karen, Gold, Marielle, Hopewell, Philip C., Lewinsohn, David M.

Year:

2012

Language:

english

File:

PDF, 17 KB

english, 2012

45

Use of 16S rRNA Gene for Identification of a Broad Range of Clinically Relevant Bacterial Pathogens

Srinivasan, Ramya, Karaoz, Ulas, Volegova, Marina, MacKichan, Joanna, Kato-Maeda, Midori, Miller, Steve, Nadarajan, Rohan, Brodie, Eoin L., Lynch, Susan V., Heimesaat, Markus M.

Journal:

Year:

2015

Language:

english

File:

PDF, 7.66 MB

english, 2015

46

The Role of Speciation in Positive Lowenstein-Jensen Culture Isolates from a High Tuberculosis Burden Country

Worodria, William, Anderson, Jillian, Cattamanchi, Adithya, Davis, J. Lucian, den Boon, Saskia, Andama, Alfred, Yoo, Samuel D., Joloba, Moses, Huang, Laurence, Kato-Maeda, Midori, Seedat, Soraya

Journal:

Year:

2011

Language:

english

File:

PDF, 172 KB

english, 2011

47

Association between Diabetes Mellitus and Tuberculosis in United States-Born and Foreign-Born Populations in San Francisco

Suwanpimolkul, Gompol, Grinsdale, Jennifer A., Jarlsberg, Leah G., Higashi, Julie, Osmond, Dennis H., Hopewell, Philip C., Kato-Maeda, Midori, Caylà, Joan A.

Journal:

Year:

2014

Language:

english

File:

PDF, 352 KB

english, 2014

48

Interplay of strain and race/ethnicity in the innate immune response to M. tuberculosis

Nahid, P., Jarlsberg, L. G., Kato-Maeda, M., Segal, M. R., Osmond, D. H., Gagneux, S., Dobos, K., Gold, M., Hopewell, P. C., Lewinsohn, D. M., Neyrolles, Olivier

Journal:

Year:

2018

Language:

english

File:

PDF, 14.04 MB

english, 2018

49

Impact of Euro-American sublineages of Mycobacterium tuberculosis on new infections among named contacts

Feng, J-Y., Jarlsberg, L. G., Rose, J., Grinsdale, J. A., Janes, M., Higashi, J., Osmond, D. H., Nahid, P., Hopewell, P. C., Kato-Maeda, M.

Journal:

The International Journal of Tuberculosis and Lung Disease

Year:

2017

Language:

english

File:

PDF, 263 KB

english, 2017

50

Tuberculosis-Related Deaths within a Well-Functioning DOTS Control Program

García-García, Maria de Lourdes, Ponce-de-León, Alfredo, García-Sancho, Maria Cecilia, Ferreyra-Reyes, Leticia, Palacios-Martínez, Manuel, Fuentes, Javier, Kato-Maeda, Midori, Bobadilla, Miriam, Small

Journal:

Emerging Infectious Diseases

Year:

2002

Language:

english

File:

PDF, 516 KB

english, 2002

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